BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F09LP1|AL425903
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1672 0.0
>3x_Contig1782
Length = 24703
Score = 1672 bits (843), Expect = 0.0
Identities = 856/860 (99%), Gaps = 2/860 (0%)
Strand = Plus / Minus
Query: 1 gatctagtagagttatcagaacgagaagtctggaaaaaatccaggaatccttgggcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18023 gatctagtagagttatcagaacgagaagtctggaaaaaatccaggaatccttgggcagat 17964
Query: 61 actaaaaagttgcccaagaatataacggttaacaaaaaccttaaattggaaaattgcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17963 actaaaaagttgcccaagaatataacggttaacaaaaaccttaaattggaaaattgcatc 17904
Query: 121 gtgttaagcgaatgaaatcaaatgaaaaaagaatgtaaaatagttggaaaagtaatcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17903 gtgttaagcgaatgaaatcaaatgaaaaaagaatgtaaaatagttggaaaagtaatcaaa 17844
Query: 181 gttttgccgaag--cttagttcaaacctgagattctcaaagttttctaatgacaaaccgg 238
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17843 gttttgccgaaggccttagttcaaacctgagattctcaaagttttctaatgacaaaccgg 17784
Query: 239 caatccgtaataataagtaataattttatatcaccaaacaatgggacggggaaaaaaaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17783 caatccgtaataataagtaataattttatatcaccaaacaatgggacggggaaaaaaaaa 17724
Query: 299 acagagatcgatagttcacttcaacctgcctgaagctcttgtcacgttcaaagtataagc 358
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17723 acagagatcgatagtacacttcaacctgcctgaagctcttgtcacgttcaaagtataagc 17664
Query: 359 tcactaaacaaacgatggcagtttcctaaagactgaggattggaaggtaatttggatcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17663 tcactaaacaaacgatggcagtttcctaaagactgaggattggaaggtaatttggatcag 17604
Query: 419 taggtcagttctgataatctttctttattaaaaacctctaatagatccttcttatcaaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17603 taggtcagttctgataatctttctttattaaaaacctctaatagatccttcttatcaaat 17544
Query: 479 gtataaaaaacttataagtwatttgagatgaatcaataaatgaatgaatggaggaacaca 538
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17543 gtataaaaaacttataagtaatttgagatgaatcaataaatgaatgaatggaggaacaca 17484
Query: 539 aagaaaagaaagatgtatacaccaaaatattaccactggtaacgttctttgttgaaaagt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17483 aagaaaagaaagatgtatacaccaaaatattaccactggtaacgttctttgttgaaaagt 17424
Query: 599 ttgaccctgacgataaatctcgaatctaaaaacttattatcttttgcctaaagcaacccg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17423 ttgaccctgacgataaatctcgaatctaaaaacttattatcttttgcctaaagcaacccg 17364
Query: 659 aacgaaaacagaaactaaattccaccattatcaggtgtgtacataagttacaagtaatag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17363 aacgaaaacagaaactaaattccaccattatcaggtgtgtacataagttacaagtaatag 17304
Query: 719 aatctctatgtttgttcctttgtttatctcatcctgccaattcttcctgtaaccgttctg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17303 aatctctatgtttgttcctttgtttatctcatcctgccaattcttcctgtaaccgttctg 17244
Query: 779 gatctggtaaaaaattggtgaagttgagaatgtatcgctatatacgatatacaaaacgcg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17243 gatctggtaaaaaattggtgaagttgagaatgtatcgctatatacgatatacaaaacgcg 17184
Query: 839 aatcaatatgaaacacgatt 858
||||||||||||||||||||
Sbjct: 17183 aatcaatatgaaacacgatt 17164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9381
Number of Sequences: 1807
Number of extensions: 9381
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)